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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913247.1_cds_XP_016463303.1_56436
CDS Infomation

[gene=LOC107786350] [db_xref=GeneID:107786350] [protein=xylem cysteine proteinase 1-like] [protein_id=XP_016463303.1] [location=complement(join(46373..46588,46968..47108,47204..47439,47898..48372))] [gbkey=CDS]
Sequence

ATGGCTATATTCTCAATTTCCAAGTTGTCACTTCTAGTCCTTTTTTCTATCTCCCTCCTG
GCCTGCACCTCATTCGCTCGCGATCATTCGATCGTGGGATACTCTTCAGATGACTTGACT
TGCATTGATAAGCTCATTAATCTTTTTGAGCATTGGATGGATAAACATGGCAAGATTTAT
AAGAGCATTGAAGAGAAGTTGCATAGGTTTGAGATTTTTAAGGATAATTTGAAACATATT
GATGAGACGAATAAGATAGTTAGTAACTATTGGCTTGGTCTAAATGAGTTTGCTGATTTG
AGCCATGATGAGTTCAAGAAAATGTATTTAGGACTCAAAGTTGATAATGAATTGCTTAAC
AAAAGAGAAAAATCTCAGCAAGAATTTGCATACAGAGATTTTGTGGATTTGCCAAAGTCT
GTTGATTGGAGAAAGAAAGGTGCTGTCACTCCTGTCAAGAACCAGGGTCAATGTGGTAGT
TGTTGGGCATTCTCAACAGTAGCGGCAGTAGAGGGAATTAACCAAATAAAGACAGGGAAT
TTGACATCATTGTCAGAACAAGAGCTCATAGACTGTGACACAACATACAACAATGGTTGC
AATGGAGGCCTAATGGATTATGCTTTTCAATTCATCATCTCTAATGGAGGTCTTCACAAA
GAAGATGATTATCCTTACCTTATGGAAGAAGGAACTTGTGATGAAAAAAGAGATGAATCT
GAGGTGGTGACAATTGATGGATATCATGATGTACCAGCCAATGATGAACAAAGTCTATTG
AAAGCACTTGCAAACCAACCTTTAAGTGTGGCTATTGAGGCTTCTGGCAGAGATTTCCAA
TTCTACAGTGGGGGTGTATTTGATGGGCATTGTGGAACAGAGTTAGATCATGGGGTTGCA
GCAGTTGGATATGGAACCACAAAAGGAGCAGATTATATAATTGTTAAGAATTCTTGGGGA
CCAAAATGGGGAGAGAAAGGTTTCATTAGAATGAAGAGAAATACAGGCAAAGCTGAAGGC
AAATGTGGCATTAACAAAATGGTTTCTTTTCCAGTCAAAAAGAAGTGA

Peptide Sequence

PEP ID

XP_016463303.1
PEP Infomation

PREDICTED: xylem cysteine proteinase 1-like [Nicotiana tabacum]
Sequence

MAIFSISKLSLLVLFSISLLACTSFARDHSIVGYSSDDLTCIDKLINLFEHWMDKHGKIY
KSIEEKLHRFEIFKDNLKHIDETNKIVSNYWLGLNEFADLSHDEFKKMYLGLKVDNELLN
KREKSQQEFAYRDFVDLPKSVDWRKKGAVTPVKNQGQCGSCWAFSTVAAVEGINQIKTGN
LTSLSEQELIDCDTTYNNGCNGGLMDYAFQFIISNGGLHKEDDYPYLMEEGTCDEKRDES
EVVTIDGYHDVPANDEQSLLKALANQPLSVAIEASGRDFQFYSGGVFDGHCGTELDHGVA
AVGYGTTKGADYIIVKNSWGPKWGEKGFIRMKRNTGKAEGKCGINKMVSFPVKKK

Transcript Sequence

Gene sequence data has not been registered.